Running nixpkgs-update (https://nix-community.org/update-bot/) with UPDATE_INFO: bcftools 1.22 -> 1.23 https://github.com/samtools/bcftools/releases attrpath: bcftools Checking auto update branch... No auto update branch exists [version] [version] updated version and sha256 [rustCrateVersion] [rustCrateVersion] No cargoHash found [golangModuleVersion] [golangModuleVersion] Not a buildGoModule package with vendorHash [npmDepsVersion] [npmDepsVersion] No npmDepsHash [updateScript] [updateScript] skipping because derivation has no updateScript Diff after rewrites: diff --git a/pkgs/by-name/bc/bcftools/package.nix b/pkgs/by-name/bc/bcftools/package.nix index 86124012879c..1bcbc8236502 100644 --- a/pkgs/by-name/bc/bcftools/package.nix +++ b/pkgs/by-name/bc/bcftools/package.nix @@ -15,13 +15,13 @@ stdenv.mkDerivation (finalAttrs: { pname = "bcftools"; - version = "1.22"; + version = "1.23"; src = fetchFromGitHub { owner = "samtools"; repo = "bcftools"; tag = finalAttrs.version; - hash = "sha256-S+FuqjiOf38sAQKWYOixv/MlXGnuDmkx9z4Co/pk/eM="; + hash = "sha256-2OSBcm9WSDCBLrSJtf09xPPqUPp1txnb72poaRJROXw="; }; nativeBuildInputs = [ Received ExitFailure 1 when running Raw command: nix-build --option sandbox true --arg config "{ allowUnfree = true; allowAliases = false; }" --arg overlays "[ ]" -A bcftools nix build failed. /build/source/bcftools gtcheck -p A,B,B,C /build/zHnOdPVgEx/gtcheck.6.vcf.gz | grep -v ^# | grep -v ^INFO .. ok test_gtcheck: /build/source/bcftools gtcheck -t 11:33 -p A,D,A,E,D,E -u GT -e 10 /build/zHnOdPVgEx/gtcheck.3.vcf.gz | grep -v ^# | grep -v ^INFO .. ok test_vcf_plugin: export BCFTOOLS_PLUGINS=/build/source/plugins; /build/source/bcftools +vcf2table /build/zHnOdPVgEx/merge.4.b.vcf.gz | grep -v ^##bcftools_ .. ok test_vcf_plugin: export BCFTOOLS_PLUGINS=/build/source/plugins; /build/source/bcftools +vcf2table /build/zHnOdPVgEx/merge.4.b.bcf | grep -v ^##bcftools_ .. ok test_vcf_plugin: export BCFTOOLS_PLUGINS=/build/source/plugins; /build/source/bcftools +vcf2table /build/zHnOdPVgEx/split-vep.2.vcf.gz -- --hide 'INFO,URL' | grep -v ^##bcftools_ .. ok test_vcf_plugin: export BCFTOOLS_PLUGINS=/build/source/plugins; /build/source/bcftools +vcf2table /build/zHnOdPVgEx/split-vep.2.bcf -- --hide 'INFO,URL' | grep -v ^##bcftools_ .. ok Number of tests: total .. 2396 passed .. 2394 failed .. 2 make: *** [Makefile:328: test-plugins] Error 1